The production of the 5600 series combine harvesters was transferred to the Đuro Đaković factory in Croatia, which is partially owned by Deutz-Fahr, and 5-apron models were added to the lower end of the range. Combine production was on a small scale, and just over 100 Deutz-Fahr combines were produced annually.

The 5600 series now featured optional Balance technology, which automatically managed the 20-degree side tilt of the cutting platform and the 6-degree longitudinal tilt of the machinery. The HTS models were equipped with a straw walker.

Four-valve technology engines with common-rail injection were introduced in 2007-2008. For 2009, the updated Commander Cab IV cockpit and the CCM onboard computer were introduced, replacing separate displays. Compared to competing brands, its small black-and-white displays, as well as the adjustment system, were quite basic.

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